Vitae

Contact Information

Email: duan@songqi.org; Homepage: https://songqi.org; Twitter @duansongqi1999.

Research Interests

Single-cell RNA-seq; Data visualization.

Education Background

Publications (# Co-first authors; * Co-corresponding authors)

See my Google Scholar page for a full list of publications.

  1. Sai Xiao#, Shoubao Ma#, Baofa Sun#, Wenchen Pu, Songqi Duan, Jingjing Han, Yaqun Hong, Jianying Zhang, Yong Peng, Chuan He, Ping Yi*, Michael A. Caligiuri*, Jianhua Yu*. The tumor-intrinsic role of the m6A reader YTHDF2 in regulating immune evasion. Science Immunology, 2024. DOI: 10.1126/sciimmunol.adl2171

  2. Songqi Duan#, Hongyu Li#, Ziqi Wang#, Junqi Li, Weiming Huang, Chen Li, Zhenfeng Fang, Zhen Zen*, Baofa Sun, Yuntao Liu*. Tibetan tea consumption prevents obesity by modulating cellular composition and metabolic reprogramming of white adipose tissue. Food & Function, 2024. DOI: 10.1039/D3FO03506A

  3. Ziqi Wang, Hongyu Li, Weimin Huang, Songqi Duan, Yue Yan, Zhen Zeng*, Zhengfeng Fang, Cheng Li, Bin Hu, Wenjuan Wu, Xiguo Lan, Yuntao Liu*. Landscapes of the main components, metabolic and microbial signatures, and their correlations during pile-fermentation of Tibetan tea. Food Chemistry, 2024. DOI: 10.1016/j.foodchem.2023.136932

  4. Shoubao Ma#, Baofa Sun#, Songqi Duan#, Jingjing Han#, Tasha Barr, Jianying Zhang, Marc B Bissonnette, Marcin Kortylewski, Chuan He, Jianjun Chen, Michael A Caligiuri*, Jianhua Yu*. YTHDF2 orchestrates tumor-associated macrophage reprogramming and controls antitumor immunity through CD8+ T cells. Nature Immunology, 2023. DOI: 10.1038/s41590-022-01398-6

  5. Jianfeng Li*#, Benben Miao#, Shixiang Wang#, Wei Dong#, Houshi Xu#, Chenchen Si#, Wei Wang, Songqi Duan, Jiacheng Lou, Zhiwei Bao, Hailuan Zeng, Zengzeng Yang, Wenyan Cheng, Fei Zhao, Jianming Zeng, Xue-Song Liu*, Renxie Wu*, Yang Shen*, Zhu Chen*, Saijuan Chen*, Mingjie Wang*, Hiplot Consortium. Hiplot: A comprehensive and easy-to-use web service for boosting publication-ready biomedical data visualization. Breifings in Bioinformatics, 2022. DOI: 10.1093/bib/bbac261

  6. Yansu Yan#, Songqi Duan#, Huilan Zhang#, Yuntao Liu*, Cheng Li, Bin Hu, Aiping Liu, Dingtao Wu, Jialiang He, Wenjuan Wu. Preparation and characterization of Konjac glucomannan and pullulan composite films for strawberry preservation. Carbohydrate polymers, 2020. DOI: 10.1016/j.carbpol.2020.116446

  7. Yuntao Liu*#, Xiaoyu Duan#, Songqi Duan, Cheng Li, Bin Hu, Aiping Liu, Yinglong Wu, Hejun Wu, Hong Chen, Wenjuan Wu. Effects of in vitro digestion and fecal fermentation on the stability and metabolic behavior of polysaccharides from Craterellus cornucopioides. Food & function, 2020. DOI: 10.1039/D0FO01430C

  8. Yuntao Liu*#, Yuan Yuan#, Songqi Duan#, Cheng Li, Bin Hu, Aiping Liu, Dingtao Wu, Haiying Cui, Lin Lin*, Jialiang He, Wenjuan Wu. Preparation and characterization of chitosan films with three kinds of molecular weight for food packaging. International Journal of Biological Macromolecules, 2020. DOI: 10.1016/j.ijbiomac.2020.03.217

  9. Yuntao Liu*#, Tingting Tang#, Songqi Duan#, Zhizhi Qin, Cheng Li, Zhiqing Zhang, Aiping Liu, Dingtao Wu, Hong Chen, Guoquan Han, Bokun Lin, Jialiang He, Wenjuan Wu. Effects of sodium alginate and rice variety on the physicochemical characteristics and 3D printing feasibility of rice paste. LWT, 2020. DOI: 10.1016/j.lwt.2020.109360

  10. Yuntao Liu*#, Tingting Tang#, Songqi Duan#, Cheng Li, Qinlu Lin, Hejun Wu, Aiping Liu, Bin Hu, Dingtao Wu, Suqing Li, Li Shen, Wenjuan Wu. The purification, structural characterization and antidiabetic activity of a polysaccharide from Anoectochilus roxburghii. Food & function, 2020. DOI: 10.1039/C9FO00860H

  11. Yuntao Liu*#, Tingting Tang#, Songqi Duan#, Zhizhi Qin, Hui Zhao, Meiyan Wang, Cheng Li, Zhiqing Zhang, Aiping Liu, Guoquan Han, Dingtao Wu, Hong Chen, Li Shen, Wenjuan Wu, Yuping Dong. Applicability of rice doughs as promising food materials in extrusion-based 3D printing. Food and Bioprocess Technology, 2020. DOI: 10.1007/s11947-020-02415-y

Website Management

Jan 2018 - Present

I created and maintained web pages for:

R packages

Computer Skills

  • Languages: R, Python, Bash
  • Applications: Adobe Illustrator, Adobe Photoshop, Office 365
  • Operating Systems: 70% MacOS and 30% Ubuntu