Toolbox S4 Class

Manages a collection of bioinformatics tools with version control. The tools slot contains a simplified structure where each tool manages its own versions: tools = list( tool1 = Tool_object, # Tool object manages multiple versions internally tool2 = Tool_object )

Slots

tools

List. List of Tool objects organized by tool name.

base_dir

Character. Base directory for tool installations.

mamba_path

Character. Path to mamba/micromamba executable.